Clinical validation of Northstar Response for monitoring mono- and combination immunotherapy efficacy in a multi-cancer cohort.

A Ali Hussainy Zaidi (Allegheny Health Network Cancer Institute, Allegheny Health Network, Pittsburgh, PA) A Ashten N. Omstead (Allegheny Health Network Cancer Institute, Allegheny Health Network, Pittsburgh, PA) L Lee McDaniel M Matthew Gordon Varga (BillionToOne, Inc., Menlo Park, CA) J Joseph Schull (BillionToOne, Menlo Park, CA) E Erin Grayhack (Allegheny Health Network Cancer Institute, Allegheny Health Network, Pittsburgh, PA) C Christopher Sherry M Muhammad Anees (Allegheny Health Network Cancer Institute, Allegheny Health Network, Pittsburgh, PA) H Hyun Young Park A Arul Goel (Allegheny Health Network Cancer Institute, Allegheny Health Network, Pittsburgh, PA) W William LaFramboise (Allegheny Health Network Cancer Institute at Allegheny Health Network, Pittsburgh, PA) B Benny Weksler (Allegheny Health Network Cancer Institute, Pittsburgh, PA) P Patrick L. Wagner G Gary Palmer (BillionToOne, Menlo Park, CA) D David L. Bartlett

Abstract

e14548 Background: Methylated circulating tumor DNA (ctDNA) enables non-invasive, real-time treatment response monitoring compared to conventional imaging. Unlike traditional ctDNA approaches that track specific mutations requiring tissue biopsies, methylation analysis offers enhanced sensitivity by increasing the amount of traceable loci. This study evaluates the clinical validity of Northstar Response, a tissue-free, methylated ctDNA assay that quantifies changes across methylated loci to generate a Tumor Methylation Score (TMS) and its association with therapeutic response. Methods: This retrospective analysis evaluated matched plasma and buffy coat samples from patients treated at Allegheny Health Network with either immuno-monotherapy or immuno-combination (IC) therapy. All patients had baseline (pre-treatment) samples and at least 1 on-treatment sample collected prior to imaging assessment. Samples were analyzed using the Northstar Response assay to generate a TMS. Using a pre-defined threshold, molecular response was defined as no change or decrease in TMS versus baseline; molecular non-response was defined as an increase in TMS score from baseline. Associations with progression-free survival (PFS) and overall survival (OS) were evaluated using Cox proportional hazard ratios (HR). Results: Among 54 evaluable patients, 61% had lung cancer, 19% melanoma, and 20% other cancers, with 41% receiving immunotherapy monotherapy and 59% IC therapy. High baseline TMS predicted shorter PFS (HR = 3.8, p < 0.001) and OS (HR = 3.1, p = 0.009), while molecular response at 3 months predicted improved PFS (HR = 0.26, p < 0.001) and OS (HR = 0.18, p < 0.001). Combined analysis showed patients with low baseline TMS and molecular response had the best outcomes (HR = 0.19, p = 0.01), while those with high baseline TMS without response had the worst (HR = 5.8, p = 0.007) when compared to low baseline, molecular non-responders as reference. Disease control rate (DCR) assessment showed significantly different TMS fold-changes (FC) between progressive disease (mean FC = 2.0, n = 11) and non-progressive disease (mean FC = 0.4, n = 33; p < 0.004). Conclusions: TMS analysis provides prognostic and predictive information for immunotherapy outcomes across multiple cancer types. The combination of baseline TMS and early on-treatment molecular response effectively stratifies patient outcomes. Additionally changes in the TMS are significantly associated with DCR. Cumulatively these data suggest that the TMS is a clinically meaningful biomarker that associates with patient survival and radiographic assessment.

Article Details

Volume / Issue Vol. 43, Issue 16_suppl
Published June 01, 2025
ISSN 0732-183X
Publisher Lippincott Williams & Wilkins

Journal Info

Journal of Clinical Oncology

Lippincott Williams & Wilkins

ISSN: 0732-183X Health Sciences

Authors (15)

A

Ali Hussainy Zaidi

Allegheny Health Network Cancer Institute, Allegheny Health Network, Pittsburgh, PA

A

Ashten N. Omstead

Allegheny Health Network Cancer Institute, Allegheny Health Network, Pittsburgh, PA

L

Lee McDaniel

M

Matthew Gordon Varga

BillionToOne, Inc., Menlo Park, CA

J

Joseph Schull

BillionToOne, Menlo Park, CA

E

Erin Grayhack

Allegheny Health Network Cancer Institute, Allegheny Health Network, Pittsburgh, PA

C

Christopher Sherry

M

Muhammad Anees

Allegheny Health Network Cancer Institute, Allegheny Health Network, Pittsburgh, PA

H

Hyun Young Park

A

Arul Goel

Allegheny Health Network Cancer Institute, Allegheny Health Network, Pittsburgh, PA

W

William LaFramboise

Allegheny Health Network Cancer Institute at Allegheny Health Network, Pittsburgh, PA

B

Benny Weksler

Allegheny Health Network Cancer Institute, Pittsburgh, PA

P

Patrick L. Wagner

G

Gary Palmer

BillionToOne, Menlo Park, CA

D

David L. Bartlett