Interferon signaling primes the lung epithelium for macrophage-mediated repair 2261178

R Ruth Franklin (Harvard Medical School) A Alan Baez Vazquez (Harvard Medical School) D Daisy Hoagland (Harvard Medical School) A Alexander Mann (Harvard Medical School) Y Yunkang Lin (Harvard Medical School) S Susanna Dang (Boston Children’s Hospital/Harvard) M Max Hauptschein (Harvard Medical School) P Patricia Rodriguez-Morales (Harvard Medical School) S Shahinoor Begum (Harvard Medical School) M Martha Castro (Harvard Med. Sch) L Louison Thorens (Northeastern University) C Carla Kim (Boston Children’s Hospital/Harvard)

Abstract

Abstract Introduction The lung is continuously exposed to the external environment and is therefore highly susceptible to infection and injury. Successful recovery following pathogen encounter requires coordinated responses between epithelial and immune compartments to restore homeostasis. Alveolar type II epithelial cells (ATIIs) act as progenitors for the alveolar epithelium, while alveolar macrophages (AMs) regulate inflammation and repair. Type I interferon (IFN-I), produced in response to viral stimuli, is essential for antiviral defense but has been traditionally viewed as antagonistic to tissue regeneration. However, whether early IFN-I sensing influences epithelial repair programs remains unclear. Methods We used in vivo models of infection (influenza) and viral stimuli (poly(I:C)) to investigate how IFN signaling influences ATII behavior. Transcriptional profiling, flow cytometry, immunofluorescence microscopy, lineage tracing, and ex vivo alveolar organoids were employed to assess ATII proliferation, phenotype, and interactions with macrophages. Results Acute IFN-I signaling in the lung transiently induced a Sca-1+ ATII population that constituted the primary proliferative subset in vivo. IFN-I exposure heightened ATII sensitivity to macrophage-derived growth factors, enhancing their responsiveness to reparative cues. Ex vivo, Sca-1+ ATIIs displayed increased organoid-forming efficiency compared with Sca-1⁻ ATIIs, consistent with elevated progenitor potential and regenerative capacity. Conclusion Together, these findings suggest that IFN-I sensing primes ATIIs for subsequent repair. This work uncovers a previously unrecognized role for IFN-I in preparing the lung epithelium for regeneration following inflammation and injury. Funding Source NIH R35GM150816, NIH F31HL172650 Topic Categories Mucosal and Regional Immunology (MUC)

Article Details

Volume / Issue Vol. 215, Issue Supplement_1
Published August 01, 2026
ISSN 0022-1767
Publisher American Association of Immunologists

Authors (12)

R

Ruth Franklin

Harvard Medical School

A

Alan Baez Vazquez

Harvard Medical School

D

Daisy Hoagland

Harvard Medical School

A

Alexander Mann

Harvard Medical School

Y

Yunkang Lin

Harvard Medical School

S

Susanna Dang

Boston Children’s Hospital/Harvard

M

Max Hauptschein

Harvard Medical School

P

Patricia Rodriguez-Morales

Harvard Medical School

S

Shahinoor Begum

Harvard Medical School

M

Martha Castro

Harvard Med. Sch

L

Louison Thorens

Northeastern University

C

Carla Kim

Boston Children’s Hospital/Harvard