MicroRNA-1246 regulates macrophage lipid metabolism and is involved in resistance to human Mycobacterium tuberculosis infection 2259565

D Deepak Tripathi A Ashutosh Tripathi V Venkata Sanjeev K Kumar Neela (Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India) K Kamakshi Prudhula Devalraju (Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India) A Anvesh Kumar Bogam (Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India) T Tanmoy Mukherjee (Center for Biomedical Research, The University of Texas Health Science Center at Tyler , Texas.) R Rajesh Kumar Radhakrishnan (Division of Infectious Diseases, Department of Internal Medicine, Saint Louis University School Medicine, St. Louis, MO 63104) V Varalakshmi Mallidi (Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India) A Abhinav Vankayalapati (Division of Infectious Diseases, Department of Internal Medicine, Saint Louis University School Medicine, St. Louis, MO 63104) M Mohammed Soheb S Sadath Ansari (Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India) C Carlos Arana (Department of Immunology, UT Southwestern Medical Center , Dallas, TX,) S Sindhu Joshi (Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India) K Karan P Singh (Department of Epidemiology and Biostatistics, The University of Texas at Tyler School of Medicine, Health Science Center, 11937US HWY 271, Tyler, TX 75708) V Vijaya Lakshmi Valluri (Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India) R Ramakrishna Vankayalapati (Division of Infectious Diseases, Department of Internal Medicine, Saint Louis University School Medicine, St. Louis, MO 63104)

Abstract

Abstract Introduction Resistance to Mycobacterium tuberculosis (Mtb) infection despite known exposure varies among individuals, but the molecular mechanisms underlying this resistance remain poorly understood. It is unclear whether microRNAs (miRNAs) influence the development of resistance to tuberculosis (TB) among individuals exposed to Mtb who remain uninfected or do not progress to active disease. Methods We analyzed blood samples from healthy household contacts (HHCs) of patients with active pulmonary TB. As reported in our previous study, 460 HHCs were recruited from 443 index TB cases, of which 293 (64.8%) remained interferon gamma release assay negative during a two-year follow-up period. Whole-transcriptome sequencing was performed at baseline (0 months) and at follow-up (24 months) to identify differentially expressed miRNAs between nonconverters, converters, and progressors. Candidate miRNAs were validated through confirmation studies, and mechanistic investigations were conducted using proteomics and computational analyses in macrophage models. Results Differential expression analysis revealed that hsa-miR-1246 (downregulated) and hsa-miR-125b (upregulated) were associated with resistance to Mtb infection in nonconverters compared with converters and progressors. Functional assays demonstrated that inhibition of hsa-miR-1246 reduced Mtb growth in macrophages by enhancing lipase activity through its target, alpha/beta hydrolase domain-containing protein 2 (ABHD2). Moreover, hsa-miR-1246 inhibition promoted glycolytic reprogramming and metabolic activation of macrophages, creating a cellular environment favorable for bacterial clearance. Conclusion Our findings identify hsa-miR-1246 as aa important regulator of macrophage metabolism and host resistance to Mtb infection. These results provide mechanistic insight into miRNA-driven immune protection and suggest potential miRNA-based therapeutic strategies to enhance resistance against tuberculosis. Funding Source CRDF Global, the Cain Foundation for Infectious Disease Research, the Department of Pulmonary Immunology, and the Department of Biotechnology (BT/PR9622/MED/15/109/2013 to VLV), New Delhi, India. Topic Categories Innate Immune Responses and Host Defense: Cellular Mechanisms (INC)

Article Details

Volume / Issue Vol. 215, Issue Supplement_1
Published August 01, 2026
ISSN 0022-1767
Publisher American Association of Immunologists

Authors (17)

D

Deepak Tripathi

A

Ashutosh Tripathi

V

Venkata Sanjeev

K

Kumar Neela

Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India

K

Kamakshi Prudhula Devalraju

Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India

A

Anvesh Kumar Bogam

Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India

T

Tanmoy Mukherjee

Center for Biomedical Research, The University of Texas Health Science Center at Tyler , Texas.

R

Rajesh Kumar Radhakrishnan

Division of Infectious Diseases, Department of Internal Medicine, Saint Louis University School Medicine, St. Louis, MO 63104

V

Varalakshmi Mallidi

Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India

A

Abhinav Vankayalapati

Division of Infectious Diseases, Department of Internal Medicine, Saint Louis University School Medicine, St. Louis, MO 63104

M

Mohammed Soheb

S

Sadath Ansari

Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India

C

Carlos Arana

Department of Immunology, UT Southwestern Medical Center , Dallas, TX,

S

Sindhu Joshi

Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India

K

Karan P Singh

Department of Epidemiology and Biostatistics, The University of Texas at Tyler School of Medicine, Health Science Center, 11937US HWY 271, Tyler, TX 75708

V

Vijaya Lakshmi Valluri

Immunology and Molecular Biology Department, Bhagwan Mahavir Medical Research Centre, Hyderabad, India

R

Ramakrishna Vankayalapati

Division of Infectious Diseases, Department of Internal Medicine, Saint Louis University School Medicine, St. Louis, MO 63104